Auxillary scripts
Snakemake can't handle the path "code/shared.R" in the cloud since the pipeline isn't executed in the same folder as the Snakefile. This change copies the "shared.R" into the folder it is executed in so we can source it.
For security reasons username/password authentication via git or docker registry will be disabled from 2025-04-28. If you are already using access tokens and/or SSH keys or only using the web interface please disregard this message, otherwise make the switch before. You can create personal access tokens here.
Snakemake can't handle the path "code/shared.R" in the cloud since the pipeline isn't executed in the same folder as the Snakefile. This change copies the "shared.R" into the folder it is executed in so we can source it.